Mp5g16920



Description

Annotation

Database ID Description
Pfam PF03018 Dirigent-like protein
PANTHER PTHR21495 NUCLEOPORIN-RELATED
MapolyID Mapoly0117s0014 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDIR33 Secondary metabolism enzyme Provisional

Associated Literature (AI-based literature mining, Beta-version)

Dirigent-like defense marker; expression was significantly higher in infected plants than controls by qRT-PCR, consistent with prior reports of up-regulation in pathogen-treated moss.

1 core 5 peripheral

Carella, P., et al. (2018) · Proceedings of the National Academy of Sciences USA: doi/10.1073/pnas.1717900115  research experimental subject
Dirigent-like defense marker; expression was significantly higher in infected plants than controls by qRT-PCR, consistent with prior reports of up-regulation in pathogen-treated moss.
Chini, A., et al. (2021) · Plant Physiology  research experimental comparator
Dirigent-like OPDA-responsive marker gene; induced by 10 uM OPDA in Tak-1 plants, induction suppressed by J4 pretreatment.
Liang, W., et al. (2024) · Plant Physiology  research experimental tool
dn-OPDA-specific marker gene whose expression was measured; significantly higher in Mpgh3age plants than WT upon wounding.
Kaji, T., et al. (2024) · iScience  research experimental tool
Dirigent-like jasmonate-signaling marker gene measured by RT-qPCR to read out hormone-induced responses.
Carella, P., et al. (2024) · Current Biology  research experimental background
Dirigent protein; defense-associated DEG.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g16920.1 chr5:20942200..20943730 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.